Coefficient of variations

Source: R/plot_taxa_cv.R

Plots CV for OTUs/ASVs.

plot_taxa_cv(x, plot.type)

Arguments

x

phyloseq-class object.

plot.type

scatter or hist (histogram)

Value

A ggplot plot object.

Details

Check if there are spurious OTUs/ASVs.

Examples

if (FALSE) {
# Example data
library(microbiome)
library(microbiomeutilities)
data("zackular2014")
p0 <- zackular2014
p <- plot_taxa_cv(p0, plot.type = "hist")
print(p)
}